Japanese encephalitis virus

All unapproved Citizendium articles may contain errors of fact, bias, grammar etc. A version of an article is unapproved unless it is marked as citable with a dedicated green template at the top of the page, as in this version of the 'Biology' article. Citable articles are intended to be of reasonably high quality. The participants in the Citizendium project make no representations about the reliability of Citizendium articles or, generally, their suitability for any purpose. This article is currently being developed as part of an Eduzendium student project in the framework of a course entitled Microbiology 201 at Queens College, CUNY. The course homepage can be found at CZ:Biol 201: General Microbiology. For the course duration, the article is closed to outside editing. Of course you can always leave comments on the discussion page. The anticipated date of course completion is May 21, 2009. One month after that date at the latest, this notice shall be removed. Besides, many other Citizendium articles welcome your collaboration!

Japanese Encephalitis Virus (JE)
Scientific classification
Phylum: Flaviviridae Genus: Flavivirus Species: Japanese encephalitis virus

General information and Symptoms

Originally named Japanese B encephalitis virus in order to aid in distinguishing this species of encephalitis with an agent causing Von Economo's type A encephalitis species, it has since been modified to a more simple name without the B. Japanese encephalitis (JE) is a virus that infects the central nervous system, which consists of the brain and spinal cord. It may range from mild to acute infection. Mild Symptoms include flu-like illness that may include:

• Headaches
• Agitation
• Fatigue
• Nausea
• Vomiting
• Chills
• Fever

A severe infection symptoms may include mild symptoms as well as:

• Rapid onset
• Stupor
• Disorientation
• Coma
• Tremors
• Occasional convlusions (occurs more often in infants)
• Spastic paralysis
• Flaccid paralysis (occurs in rare instances)

As the infection progresses without treatment it may reach an acute level. When such a high level of infection occurs, there are serious side affects which include moderate brain damage, varying degrees of paralysis, as well as seizures and death.

Transmission and Epidemiology

Japanese encephalitis virus is considered an arthropod virus called an arbovirus. The vector that spreads this arbovirus is a mosquito. The Culicine mosquito from the genus Culex are responsible for many diseases such as Dengue fever, Yellow fever, Venezuelan equine encephalitis, as well as the Japanese encephalitis. Their eggs are laid in still water that is either clean water or contaminated with organic waste. These eggs are also resistant to dessication for several months. The first reported suspicion of JE was within the last century and first documented in horses as well as humans in Japan, which explains the origin of it's name. The virus was first isolated from human brain tissue in rabbits in 1924. The specific species of Culex mosquitos linked to the JE virus is the C. tritaeniorhynchus. Infection into a healthy human begins with an infected mosquito. This mosquito lands on a human's skin and bites the victim, this transmits the virus into the bloodstream and is able to cause viraemia, the virus being spread intially from the bite site which allows it access to the rest of the body through the circulatory system. The way a mosquito can be infected with the virus is from feeding on infected humans, horses, and cattle. These are all hosts that are dead-end and due to high rates of fatality do not transmit the disease as readily, however, swine are largely asymptomatic hosts. The only exception is the high abnormalities and abortions of fetal swine in pregnant sows. Due to their lack of symptoms mosquitos are more likely to feed on a seemingly healthy pig. This causes the mosquito to be contaminated and become a vector. Infection in humans occur in the cochlea of the ear. The species that is most significant in the JE virus, C. tritaeniorhynchus, typically feeds on bovine animals. Despite suggestions of the spraying of pesticides to kill mosquito vectors and moving swine herds to more rural areas away from humans there is a belief among many that Japanese encephilitis will not be eliminated because the natural host for this virus is a bird. JE is the most prevalent of viral encephalitis in Asia with 30,000-50,000 cases reported each year, of those cases fatalities fall between 0.3-60%. There is a high risk of contracting this virus in rural areas that are endemic locations. Some cities have had success in conquering major epidemic outbreaks of JE, such as Thailand, Taiwan, Japan, China, and Korea. They have done this with vaccinations. While these countries, to a certain extent, have successfully contained this virus, some still have periodic outbreaks. The countries that fall into this category are Malaysia, Myanmar, India, Nepal, Cambodia, and Vietnam. Despite JE occuring mostly in Asia, 1998 was the first report of 2 fatal cases of JE on the mainland of northern Australia.

Pathology

Japanese Encephalitis is antigenically linked to several other flaviviruses and belongs to the family Flaviviridae. In the autopsies performed on 20 persons who died in the 1924 encephalitis epidemic of Tokyo, Nagano, and Shikoku districts of Japan there were 9 cases of acute, 8 subacute cases, and 3 chronic cases. An acute case typically lasts between 1-2 weeks, subacute would be 2 or more weeks while chronic cases are several months to several years with some permanent sequelae. In this study both qualitative and quantitative approaches were used. The focus of this study was the inflammatory changes of the central nervous system (CNS). In acute cases there were areas of degenerative tissue, severe damage of the nerve cells, neuronophagia which is the phagocytosis of infected neurons, perivascular cuffing, and injury to the parenchyma. The grey matter of the brain is where all these changes occur. Lesions are usually found in the diencephalon and mesencephalon, then the next highest frequency are found in the brain stem, cerebral cortex and the cerebellum. There may also be slight changes seen in the leptomeninges of the spinal cord. In subacute cases, changes are found to be less than that of acute cases. the inflammation is still found in the mesencephalon, diencephalon and brain stem but is rare found in the cerebral cortex, cerebellum, meninges, and spinal cord. The most dominant changes in this stage is degeneration, even to the point of loss, of nerve cells and proliferation of glial cells. Lesions also are more localized. Hylalin thrombus formation, a blood clot, may be found in both acute and subacute stages. Chronic stages localized nercosis or softening is seen in the mesencephalon, diencephalon, and brain stem but is most often in the substantia nigra. There is also degeneration of nervous tissue that may lead to complete loss, fibrous thickening of the vascular walls, and marked post-inflammatory organization. Overall, there are cellular changes in the reticulo-endothelial system of the visceral organs. Studies have shown that the cells seem to be undergoing karyolysis or autolysis (cell suicide). Karyolysis is the chromatin matter dissolution by DNAase by a dying cell.Autolysis and karyolysis are most often seen in acute cases.

Ecology

Japanese encephalitis is a disease that is the major cause of viral encephalitis in southeast Asia, with the number of infected cases greater than 50,000 annually In Malaysia JE is an endemic, the first case reported was during World War II and was published in 1951. The number of cases reported were 273 from 1985-1993, this however does not take into account undocumented cases. The Land of the Rising sun, Japans nickname, is where JE is an endemic disease. The Japanese climate, where the first case of JE was reported, is temperate allowing for variations as you travel north to south. It is a country of over three thousand islands that is home to one of the most densely populated people in the world. The estimated population is 127.3 million people with the most dominant ethnic group being the Yamato people. Due to steep elevations , climate and earthquakes about 70-80% of the country is forested, mountainous and not ideal for agricultural use, living, or industrial use. The earthquakes are a result of Japan's positioning on the Pacific Ring of Fire, which is at the juncture of three tectonic plates. It is known that Ardeid wading birds are the primary maintenance hosts, swine are the main amplifying hosts, and the Culex mosquitos are the primary vectors. in 1995 was the first record of JE virus in northern Australia and by late 1998 the swine, which previously lived in the backyardpen's of their owner's house were linked to an early 1998 outbreak that was widespread on the Bandu island. The mosquito responsible as the vector of JE virus in this area is the Cx.sitiens subgroup. There are also a percentage of mosquitos from the Culex genus that feed on birds such as viremic egrets and herons which are found on the Badu island.

Structure and Metabolism

JE is an enveloped virus that has positive sense single stranded RNA genome (+ssRNA). The outer envelope aids in the viral entry to cell through its composition, it is composed of (E) protein which is a protective antigen. The structure is packaged in a capsid formed by the capsid protein. genome encodes the structure proteins:

• NS1
• NS2 a and b
• NS3(a putative helicase)
• N4a
• NS4b
• NS5(a viral polymerase)

This type of the encephalitis virus causes rapid and significant build up of viral proteins. Incubation period is between 5 to 15 days with most cases expressing no symptoms, only 1 in 250 infected individuals developing encephalitis. In the autopsies performed on 20 persons who died in the 1924 encephalitis epidemic of Tokyo, Nagano, and Shikoku districts of Japan there were 9 cases of acute, 8 subacute cases, and 3 chronic cases. An acute case typically lasts between 1-2 weeks, subacute would be 2 or more weeks while chronic cases are several months to several years with some permanent sequelae. In this study both qualitative and quantitative approaches were used. The focus of this study was the inflammatory changes of the central nervous system (CNS). In acute cases there were areas of degenerative tissue, severe damage of the nerve cells, neuronophagia which is the phagocytosis of infected neurons, perivascular cuffing, and injury to the parenchyma. The grey matter of the brain is where all these changes occur. Lesions are usually found in the diencephalon and mesencephalon, then the next highest frequency are found in the brain stem, cerebral cortex and the cerebellum. There may also be slight changes seen in the leptomeninges of the spinal cord. In subacute cases, changes are found to be less than that of acute cases. the inflammation is still found in the mesencephalon, diencephalon and brain stem but is rare found in the cerebral cortex, cerebellum, meninges, and spinal cord. The most dominant changes in this stage is degeneration, even to the point of loss, of nerve cells and proliferation of glial cells. Lesions also are more localized. Hylalin thrombus formation, a blood clot, may be found in both acute and subacute stages. Chronic stages localized nercosis or softening is seen in the mesencephalon, diencephalon, and brain stem but is most often in the substantia nigra. There is also degeneration of nervous tissue that may lead to complete loss, fibrous thickening of the vascular walls, and marked post-inflammatory organization. Overall, there are cellular changes in the reticulo-endothelial system of the visceral organs. Studies have shown that the cells seem to be undergoing karyolysis or autolysis (cell suicide). Karyolysis is the chromatin matter dissolution by DNAase by a dying cell.Autolysis and karyolysis are most often seen in acute cases.

Current Research

In 1995 an emergence of JE virus was seen in northern Australia. A study was done to see how removing domesticated pigs further from heavily populated areas on the Badu Island in the Torres straight would affect the mosquito infection rates. The reason why this area was chosen was due to it being the most infected area for humans, swine and animals. A link was found between intense transmission and the domesticated pigs that were housed in close proximity on the same grounds as where their human owner's dwelling place. In 1998 there was a widespread outbreak that led to an approximately 2.5 km move of all domesticated pigs to a piggery. This immediately led to a reduction in the Culex mosquitos (specifically the Cx.sitiens) to feed on the infected or potentially infected pigs. The conclusion to this study indicated that despite moving the infected pigs away from the immediate areas where the mosquito vectors could be infected by biting those pigs it did not negate JE viral risk for humans. This is because the pigs that were removed from that area could be bitten by the same mosquito vectors from other areas and travel to populated areas. The mean flight distance for a Culex mosquito is 4.4km, which is further than the 2.5 km the pigs were moved for this study, the greatest distance a female mosquito of this genus can travel is up to 12 km. The recommendation in this case is to move domesticated infected pigs further than 5 km away from any human inhabitant. Also an important aspect of this study is that 23% of blood meals for the Culex mosquito are birds such as the herons and egrets. Both populations reside on the Badu island.